Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SncaO55042 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SncaO55042 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.76□□□□□ -0.37
SncaO55042 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SncaO55042 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SncaO55042 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.75□□□□□ -0.37
SncaO55042 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SncaO55042 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SncaO55042 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SncaO55042 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.75□□□□□ -0.37
SncaO55042 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
SncaO55042 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SncaO55042 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.74□□□□□ -0.37
SncaO55042 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.74□□□□□ -0.37
SncaO55042 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SncaO55042 Gm45328-201ENSMUST00000210942 917 ntBASIC12.74□□□□□ -0.37
SncaO55042 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.74□□□□□ -0.37
SncaO55042 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SncaO55042 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SncaO55042 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.73□□□□□ -0.37
SncaO55042 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SncaO55042 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SncaO55042 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SncaO55042 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SncaO55042 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SncaO55042 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SncaO55042 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SncaO55042 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms