Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Gm22065-201ENSMUST00000103753 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm22066-201ENSMUST00000103761 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24932-201ENSMUST00000103763 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24115-201ENSMUST00000103799 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm22190-201ENSMUST00000103827 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm22191-201ENSMUST00000103831 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24721-201ENSMUST00000103849 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm28018-201ENSMUST00000103869 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm26399-201ENSMUST00000103937 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Prom1O54990 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Prom1O54990 Gm25349-201ENSMUST00000177728 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm23616-201ENSMUST00000177797 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm25871-201ENSMUST00000177816 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24752-201ENSMUST00000178240 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24496-201ENSMUST00000178287 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm25649-201ENSMUST00000178476 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm25548-201ENSMUST00000178681 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm23147-201ENSMUST00000178841 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm26095-201ENSMUST00000179270 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm22171-201ENSMUST00000179283 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm23936-201ENSMUST00000179354 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm22619-201ENSMUST00000179516 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm25255-201ENSMUST00000179579 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24755-201ENSMUST00000179691 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm26506-201ENSMUST00000179692 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm25086-201ENSMUST00000179931 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm23243-201ENSMUST00000180047 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24659-201ENSMUST00000180212 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm24169-201ENSMUST00000180244 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm23689-201ENSMUST00000180354 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Gm27359-201ENSMUST00000184153 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm27785-201ENSMUST00000184268 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm27466-201ENSMUST00000184396 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Gm27703-201ENSMUST00000184836 110 ntBASIC16.91■□□□□ 0.3
Prom1O54990 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Prom1O54990 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Prom1O54990 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.9■□□□□ 0.3
Prom1O54990 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prom1O54990 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prom1O54990 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Prom1O54990 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Gm6973-201ENSMUST00000117080 721 ntBASIC16.9■□□□□ 0.3
Prom1O54990 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.9■□□□□ 0.3
Prom1O54990 Gm2272-201ENSMUST00000194903 582 ntBASIC16.9■□□□□ 0.3
Prom1O54990 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prom1O54990 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.9■□□□□ 0.3
Prom1O54990 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prom1O54990 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prom1O54990 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Prom1O54990 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Prom1O54990 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Prom1O54990 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Prom1O54990 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prom1O54990 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Prom1O54990 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Prom1O54990 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Prom1O54990 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Mir7023-201ENSMUST00000185093 64 ntBASIC16.89■□□□□ 0.29
Prom1O54990 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.89■□□□□ 0.29
Prom1O54990 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Prom1O54990 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prom1O54990 App-207ENSMUST00000227737 2827 ntBASIC16.88■□□□□ 0.29
Prom1O54990 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.88■□□□□ 0.29
Prom1O54990 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prom1O54990 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.88■□□□□ 0.29
Prom1O54990 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Prom1O54990 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms