Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.68■□□□□ 0.1
Banf1O54962 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Banf1O54962 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Banf1O54962 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Banf1O54962 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Banf1O54962 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Banf1O54962 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Gm27742-201ENSMUST00000184667 60 ntBASIC15.67■□□□□ 0.1
Banf1O54962 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Banf1O54962 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Banf1O54962 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Banf1O54962 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Banf1O54962 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Banf1O54962 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Banf1O54962 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.66■□□□□ 0.1
Banf1O54962 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.66■□□□□ 0.1
Banf1O54962 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Banf1O54962 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Banf1O54962 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Banf1O54962 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Banf1O54962 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Banf1O54962 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Banf1O54962 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.65■□□□□ 0.1
Banf1O54962 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Banf1O54962 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Gm27867-201ENSMUST00000184778 125 ntBASIC15.65■□□□□ 0.1
Banf1O54962 Gm44454-201ENSMUST00000198541 138 ntBASIC15.65■□□□□ 0.1
Banf1O54962 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.65■□□□□ 0.1
Banf1O54962 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Banf1O54962 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.65■□□□□ 0.1
Banf1O54962 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Banf1O54962 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Banf1O54962 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Banf1O54962 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.64■□□□□ 0.1
Banf1O54962 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.64■□□□□ 0.09
Banf1O54962 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Banf1O54962 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.64■□□□□ 0.09
Banf1O54962 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.64■□□□□ 0.09
Banf1O54962 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.64■□□□□ 0.09
Banf1O54962 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.64■□□□□ 0.09
Banf1O54962 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Banf1O54962 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Banf1O54962 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms