Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.71□□□□□ -0.21
Lsm2O35900 Gm13436-201ENSMUST00000120418 567 ntBASIC13.71□□□□□ -0.21
Lsm2O35900 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.71□□□□□ -0.21
Lsm2O35900 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.71□□□□□ -0.21
Lsm2O35900 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.71□□□□□ -0.21
Lsm2O35900 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Lsm2O35900 Gm5417-201ENSMUST00000079706 384 ntBASIC13.71□□□□□ -0.21
Lsm2O35900 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Lsm2O35900 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Lsm2O35900 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Lsm2O35900 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm2O35900 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm2O35900 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm2O35900 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lsm2O35900 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lsm2O35900 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Gm14722-201ENSMUST00000118943 689 ntBASIC13.7□□□□□ -0.22
Lsm2O35900 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.7□□□□□ -0.22
Lsm2O35900 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Gm9987-201ENSMUST00000069768 567 ntBASIC13.7□□□□□ -0.22
Lsm2O35900 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.7□□□□□ -0.22
Lsm2O35900 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lsm2O35900 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Lsm2O35900 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lsm2O35900 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.69□□□□□ -0.22
Lsm2O35900 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.69□□□□□ -0.22
Lsm2O35900 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Lsm2O35900 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.69□□□□□ -0.22
Lsm2O35900 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lsm2O35900 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lsm2O35900 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.68□□□□□ -0.22
Lsm2O35900 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.68□□□□□ -0.22
Lsm2O35900 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.68□□□□□ -0.22
Lsm2O35900 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.68□□□□□ -0.22
Lsm2O35900 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lsm2O35900 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms