Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Stx1aO35526 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.31■□□□□ 0.36
Stx1aO35526 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.31■□□□□ 0.36
Stx1aO35526 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.31■□□□□ 0.36
Stx1aO35526 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Stx1aO35526 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Stx1aO35526 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Stx1aO35526 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Stx1aO35526 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Stx1aO35526 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Stx1aO35526 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Gm6433-201ENSMUST00000118634 875 ntBASIC17.3■□□□□ 0.36
Stx1aO35526 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.3■□□□□ 0.36
Stx1aO35526 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.3■□□□□ 0.36
Stx1aO35526 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Stx1aO35526 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Stx1aO35526 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Stx1aO35526 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Stx1aO35526 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Stx1aO35526 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Stx1aO35526 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.29■□□□□ 0.36
Stx1aO35526 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.29■□□□□ 0.36
Stx1aO35526 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.29■□□□□ 0.36
Stx1aO35526 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.29■□□□□ 0.36
Stx1aO35526 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Stx1aO35526 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.29■□□□□ 0.36
Stx1aO35526 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Stx1aO35526 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Stx1aO35526 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.28■□□□□ 0.36
Stx1aO35526 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.28■□□□□ 0.36
Stx1aO35526 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.28■□□□□ 0.36
Stx1aO35526 Gm14722-201ENSMUST00000118943 689 ntBASIC17.28■□□□□ 0.36
Stx1aO35526 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Stx1aO35526 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Stx1aO35526 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.28■□□□□ 0.36
Stx1aO35526 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Stx1aO35526 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Stx1aO35526 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Stx1aO35526 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Stx1aO35526 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Stx1aO35526 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms