Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Cx3cl1O35188 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Cx3cl1O35188 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cx3cl1O35188 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cx3cl1O35188 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cx3cl1O35188 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.48□□□□□ -0.09
Cx3cl1O35188 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cx3cl1O35188 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Gm7222-201ENSMUST00000117512 906 ntBASIC14.47□□□□□ -0.09
Cx3cl1O35188 Gm18733-201ENSMUST00000173950 856 ntBASIC14.47□□□□□ -0.09
Cx3cl1O35188 Gm6550-201ENSMUST00000187574 993 ntBASIC14.47□□□□□ -0.09
Cx3cl1O35188 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.47□□□□□ -0.09
Cx3cl1O35188 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.47□□□□□ -0.09
Cx3cl1O35188 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cx3cl1O35188 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.46□□□□□ -0.09
Cx3cl1O35188 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Mir5131-201ENSMUST00000175426 93 ntBASIC14.46□□□□□ -0.09
Cx3cl1O35188 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cx3cl1O35188 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Cx3cl1O35188 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.46□□□□□ -0.1
Cx3cl1O35188 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.45□□□□□ -0.1
Cx3cl1O35188 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Gm2651-201ENSMUST00000203560 838 ntBASIC14.45□□□□□ -0.1
Cx3cl1O35188 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cx3cl1O35188 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.45□□□□□ -0.1
Cx3cl1O35188 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.44□□□□□ -0.1
Cx3cl1O35188 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cx3cl1O35188 AV026068-213ENSMUST00000223675 1171 ntBASIC14.44□□□□□ -0.1
Cx3cl1O35188 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.44□□□□□ -0.1
Cx3cl1O35188 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cx3cl1O35188 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms