Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndufb11O09111 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.37□□□□□ -0.43
Ndufb11O09111 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ndufb11O09111 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.37□□□□□ -0.43
Ndufb11O09111 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndufb11O09111 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndufb11O09111 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.37□□□□□ -0.43
Ndufb11O09111 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndufb11O09111 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndufb11O09111 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ndufb11O09111 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ndufb11O09111 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndufb11O09111 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ndufb11O09111 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.36□□□□□ -0.43
Ndufb11O09111 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.36□□□□□ -0.43
Ndufb11O09111 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.36□□□□□ -0.43
Ndufb11O09111 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ndufb11O09111 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ndufb11O09111 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.35□□□□□ -0.43
Ndufb11O09111 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ndufb11O09111 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ndufb11O09111 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm14117-201ENSMUST00000122417 843 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm45102-201ENSMUST00000207427 857 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.35□□□□□ -0.43
Ndufb11O09111 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.35□□□□□ -0.43
Ndufb11O09111 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ndufb11O09111 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.35□□□□□ -0.43
Ndufb11O09111 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.34□□□□□ -0.43
Ndufb11O09111 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.34□□□□□ -0.43
Ndufb11O09111 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Ndufb11O09111 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ndufb11O09111 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.34□□□□□ -0.43
Ndufb11O09111 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms