Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfrsf11bO08712 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.64■□□□□ 0.09
Tnfrsf11bO08712 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Gm12895-201ENSMUST00000122214 226 ntBASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Gm8655-201ENSMUST00000221159 852 ntBASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tnfrsf11bO08712 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tnfrsf11bO08712 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Grk6-207ENSMUST00000225925 2769 ntBASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf11bO08712 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms