Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC8.82□□□□□ -1
H2al1kJ3QP08 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
H2al1kJ3QP08 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
H2al1kJ3QP08 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC8.81□□□□□ -1
H2al1kJ3QP08 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC8.81□□□□□ -1
H2al1kJ3QP08 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Gm28182-201ENSMUST00000188354 2477 ntBASIC8.8□□□□□ -1
H2al1kJ3QP08 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Nsd1-206ENSMUST00000224918 1001 ntBASIC8.8□□□□□ -1
H2al1kJ3QP08 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Gm10176-201ENSMUST00000159707 2264 ntBASIC8.8□□□□□ -1
H2al1kJ3QP08 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Acot6-202ENSMUST00000222921 3622 ntBASIC8.8□□□□□ -1
H2al1kJ3QP08 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC8.8□□□□□ -1
H2al1kJ3QP08 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
H2al1kJ3QP08 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
H2al1kJ3QP08 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
H2al1kJ3QP08 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
H2al1kJ3QP08 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
H2al1kJ3QP08 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
H2al1kJ3QP08 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms