Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Gm9063-201ENSMUST00000223299 582 ntBASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
B020004C17RikJ3QP07 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Gm27680-201ENSMUST00000184192 160 ntBASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
B020004C17RikJ3QP07 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
B020004C17RikJ3QP07 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
B020004C17RikJ3QP07 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Gm7730-201ENSMUST00000212486 454 ntBASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
B020004C17RikJ3QP07 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Gm13823-201ENSMUST00000119930 345 ntBASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
B020004C17RikJ3QP07 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
B020004C17RikJ3QP07 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
B020004C17RikJ3QP07 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
B020004C17RikJ3QP07 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
B020004C17RikJ3QP07 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
B020004C17RikJ3QP07 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
B020004C17RikJ3QP07 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms