Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.06□□□□□ -0.16
Shisa8J3QNX5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Gm45058-201ENSMUST00000205810 766 ntBASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shisa8J3QNX5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.04□□□□□ -0.16
Shisa8J3QNX5 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shisa8J3QNX5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Gm18959-201ENSMUST00000208954 655 ntBASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Gm21559-201ENSMUST00000220638 855 ntBASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Gm8587-201ENSMUST00000076538 843 ntBASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.03□□□□□ -0.16
Shisa8J3QNX5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms