Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sh3tc1G3X9F6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc1G3X9F6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc1G3X9F6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc1G3X9F6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc1G3X9F6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh3tc1G3X9F6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Gm6415-201ENSMUST00000118488 348 ntBASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3tc1G3X9F6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Gm13223-201ENSMUST00000118609 747 ntBASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh3tc1G3X9F6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.52■□□□□ 0.55
Sh3tc1G3X9F6 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3tc1G3X9F6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3tc1G3X9F6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Sh3tc1G3X9F6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Gm38225-201ENSMUST00000194001 393 ntBASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3tc1G3X9F6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3tc1G3X9F6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm12151-201ENSMUST00000121374 290 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm23547-201ENSMUST00000158210 271 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm27618-201ENSMUST00000183671 60 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3tc1G3X9F6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms