Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Gm4984-201ENSMUST00000115987 360 ntBASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Gm11918-201ENSMUST00000121660 179 ntBASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Gm24694-201ENSMUST00000180054 110 ntBASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Gm27663-201ENSMUST00000184839 110 ntBASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Gm27427-201ENSMUST00000185134 193 ntBASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nkx1-1G3UXB3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Gm16198-201ENSMUST00000118766 670 ntBASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Gm45453-201ENSMUST00000211758 853 ntBASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 AC164597.2-201ENSMUST00000226738 603 ntBASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx1-1G3UXB3 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gm12008-201ENSMUST00000117791 755 ntBASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gm11877-201ENSMUST00000118921 852 ntBASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Mir1982-201ENSMUST00000157368 74 ntBASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx1-1G3UXB3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm25507-201ENSMUST00000116981 144 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm15529-201ENSMUST00000121833 994 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm38225-201ENSMUST00000194001 393 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm37466-201ENSMUST00000195692 652 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm5708-201ENSMUST00000196289 886 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm44061-201ENSMUST00000203962 1195 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 Gm44421-201ENSMUST00000205064 1221 ntBASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC17.67■□□□□ 0.42
Nkx1-1G3UXB3 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms