Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Gm25745-201ENSMUST00000174945 133 ntBASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Gm18622-201ENSMUST00000219361 595 ntBASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdh9F8VPK8 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Gm8344-201ENSMUST00000119813 856 ntBASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Gm12497-201ENSMUST00000138778 237 ntBASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Gm17807-201ENSMUST00000186869 298 ntBASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdh9F8VPK8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdh9F8VPK8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh9F8VPK8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh9F8VPK8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.77■□□□□ 0.11
Pcdh9F8VPK8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdh9F8VPK8 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.77■□□□□ 0.11
Pcdh9F8VPK8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh9F8VPK8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh9F8VPK8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh9F8VPK8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh9F8VPK8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh9F8VPK8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh9F8VPK8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh9F8VPK8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh9F8VPK8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms