Protein–RNA interactions for Protein: F7BCN0

Gm28048, Predicted gene, 28048 (Fragment), mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28048F7BCN0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Gm13436-201ENSMUST00000120418 567 ntBASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm28048F7BCN0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Gm10812-201ENSMUST00000099864 546 ntBASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm28048F7BCN0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Gm27011-201ENSMUST00000182352 972 ntBASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm28048F7BCN0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Gm12134-201ENSMUST00000122109 520 ntBASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm28048F7BCN0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms