Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc188F6WEU2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm26461-201ENSMUST00000175064 290 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm3436-201ENSMUST00000179930 840 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm18056-201ENSMUST00000207670 568 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm18061-201ENSMUST00000208350 562 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm18063-201ENSMUST00000208529 568 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm18052-201ENSMUST00000208750 559 ntBASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccdc188F6WEU2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Gm27243-201ENSMUST00000183964 521 ntBASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Gm27701-201ENSMUST00000184498 110 ntBASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Gm37466-201ENSMUST00000195692 652 ntBASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Dupd1-202ENSMUST00000224735 548 ntBASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.41■□□□□ 0.06
Ccdc188F6WEU2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccdc188F6WEU2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Ccdc188F6WEU2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc188F6WEU2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc188F6WEU2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.39■□□□□ 0.05
Ccdc188F6WEU2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc188F6WEU2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc188F6WEU2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.39■□□□□ 0.05
Ccdc188F6WEU2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Ccdc188F6WEU2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms