Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Mir3102-201ENSMUST00000175555 104 ntBASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Gm31326-201ENSMUST00000191856 1048 ntBASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Gm43703-201ENSMUST00000200523 763 ntBASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc85cE9Q6B2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc85cE9Q6B2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc85cE9Q6B2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc85cE9Q6B2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc85cE9Q6B2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.83■□□□□ 0.61
Ccdc85cE9Q6B2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc85cE9Q6B2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Gm9002-201ENSMUST00000178437 499 ntBASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ccdc85cE9Q6B2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc85cE9Q6B2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Gm10766-202ENSMUST00000194123 606 ntBASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Olfr582-201ENSMUST00000098212 960 ntBASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc85cE9Q6B2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 AC114008.2-201ENSMUST00000227699 1347 ntBASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Mir1247-201ENSMUST00000116706 82 ntBASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc85cE9Q6B2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms