Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Gm6091-201ENSMUST00000098307 165 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col6a3E9PWQ3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Gm22334-201ENSMUST00000158070 133 ntBASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Gm8805-201ENSMUST00000117848 313 ntBASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.18■□□□□ 0.02
Col6a3E9PWQ3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Gm38158-201ENSMUST00000194617 339 ntBASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Gm43830-201ENSMUST00000198760 1067 ntBASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.17■□□□□ 0.02
Col6a3E9PWQ3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 B9d1os-201ENSMUST00000137010 674 ntBASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Gm12341-201ENSMUST00000119724 503 ntBASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Col6a3E9PWQ3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Gm19309-201ENSMUST00000218295 205 ntBASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Snord83b-201ENSMUST00000104546 94 ntBASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Col6a3E9PWQ3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms