Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.31■□□□□ 0.2
Rfx8D3YU81 Gm7230-201ENSMUST00000173026 815 ntBASIC16.31■□□□□ 0.2
Rfx8D3YU81 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rfx8D3YU81 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.3■□□□□ 0.2
Rfx8D3YU81 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Gm27646-201ENSMUST00000183989 110 ntBASIC16.3■□□□□ 0.2
Rfx8D3YU81 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.3■□□□□ 0.2
Rfx8D3YU81 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfx8D3YU81 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.29■□□□□ 0.2
Rfx8D3YU81 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Rfx8D3YU81 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Gm7222-201ENSMUST00000117512 906 ntBASIC16.29■□□□□ 0.2
Rfx8D3YU81 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.29■□□□□ 0.2
Rfx8D3YU81 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfx8D3YU81 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rfx8D3YU81 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx8D3YU81 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Gm10060-201ENSMUST00000212002 111 ntBASIC16.28■□□□□ 0.2
Rfx8D3YU81 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.28■□□□□ 0.2
Rfx8D3YU81 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx8D3YU81 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx8D3YU81 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms