Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Celf4-206ENSMUST00000224553 1729 ntBASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Asic1-205ENSMUST00000228185 1818 ntBASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Gm4875-201ENSMUST00000118257 786 ntBASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Gm6218-201ENSMUST00000219812 628 ntBASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col4a6B1AVK5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a6B1AVK5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col4a6B1AVK5 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a6B1AVK5 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms