Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
IsxA1A546 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.35□□□□□ -0.11
IsxA1A546 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IsxA1A546 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
IsxA1A546 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
IsxA1A546 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.34□□□□□ -0.11
IsxA1A546 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IsxA1A546 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
IsxA1A546 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
IsxA1A546 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IsxA1A546 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
IsxA1A546 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
IsxA1A546 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.11
IsxA1A546 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IsxA1A546 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IsxA1A546 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
IsxA1A546 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
IsxA1A546 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
IsxA1A546 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
IsxA1A546 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
IsxA1A546 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
IsxA1A546 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.33□□□□□ -0.12
IsxA1A546 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.33□□□□□ -0.12
IsxA1A546 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.33□□□□□ -0.12
IsxA1A546 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
IsxA1A546 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
IsxA1A546 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
IsxA1A546 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.32□□□□□ -0.12
IsxA1A546 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
IsxA1A546 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.32□□□□□ -0.12
IsxA1A546 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.32□□□□□ -0.12
IsxA1A546 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 Gm6433-201ENSMUST00000118634 875 ntBASIC14.32□□□□□ -0.12
IsxA1A546 Gm12085-201ENSMUST00000119263 940 ntBASIC14.32□□□□□ -0.12
IsxA1A546 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.32□□□□□ -0.12
IsxA1A546 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.32□□□□□ -0.12
IsxA1A546 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
IsxA1A546 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms