Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Efs-202ENSMUST00000227037 2540 ntBASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav12d-1A0N8R0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav12d-1A0N8R0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav12d-1A0N8R0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Gm12134-201ENSMUST00000122109 520 ntBASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav12d-1A0N8R0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm6433-201ENSMUST00000118634 875 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm13312-201ENSMUST00000119631 718 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.37□□□□□ -0.43
Trav12d-1A0N8R0 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms