Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc112A0AUP1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc112A0AUP1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.58■□□□□ 0.41
Ccdc112A0AUP1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc112A0AUP1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Gm15165-201ENSMUST00000118140 502 ntBASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Gm25745-201ENSMUST00000174945 133 ntBASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Gm18622-201ENSMUST00000219361 595 ntBASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc112A0AUP1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc112A0AUP1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms