Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cfap99A0A140LIX9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 App-207ENSMUST00000227737 2827 ntBASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cfap99A0A140LIX9 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Gm15500-202ENSMUST00000071641 1019 ntBASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cfap99A0A140LIX9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Gm15920-201ENSMUST00000118998 402 ntBASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfap99A0A140LIX9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Gm17271-201ENSMUST00000165535 355 ntBASIC18.35■□□□□ 0.53
Cfap99A0A140LIX9 Gm37153-201ENSMUST00000193637 231 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms