Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ccdc194A0A140LIT1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.33■□□□□ 0.05
Ccdc194A0A140LIT1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.33■□□□□ 0.05
Ccdc194A0A140LIT1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc194A0A140LIT1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc194A0A140LIT1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ccdc194A0A140LIT1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Ccdc194A0A140LIT1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
Ccdc194A0A140LIT1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ccdc194A0A140LIT1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Gm15165-201ENSMUST00000118140 502 ntBASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ccdc194A0A140LIT1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 BC037039-201ENSMUST00000192003 2205 ntBASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.31■□□□□ 0.04
Ccdc194A0A140LIT1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms