Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm11950-201ENSMUST00000121615 838 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm8825-201ENSMUST00000182565 998 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm4518-201ENSMUST00000182638 718 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv29A0A0G2LB96 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Gm6345-202ENSMUST00000180900 204 ntBASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv29A0A0G2LB96 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv29A0A0G2LB96 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv29A0A0G2LB96 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms