Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm10812-201ENSMUST00000099864 546 ntBASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav9d-4A0A0G2JG37 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm11539-201ENSMUST00000119837 557 ntBASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm715-201ENSMUST00000117865 831 ntBASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav9d-4A0A0G2JG37 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms