Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm16425-201ENSMUST00000118143 3130 ntBASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Mir770-201ENSMUST00000103252 94 ntBASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm15565-201ENSMUST00000118890 427 ntBASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13d-4A0A0G2JFX3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms