Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gm14859-201ENSMUST00000117752 357 ntBASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gm7977-201ENSMUST00000193787 748 ntBASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gm44454-201ENSMUST00000198541 138 ntBASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gm45212-201ENSMUST00000205831 3403 ntBASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gm27357-201ENSMUST00000183754 135 ntBASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv4-53A0A0G2JFC6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms