Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm7230-201ENSMUST00000173026 815 ntBASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm8825-201ENSMUST00000182565 998 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm4518-201ENSMUST00000182638 718 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13n-1A0A0G2JEU8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms