Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm13418-201ENSMUST00000119097 944 ntBASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm8344-201ENSMUST00000119813 856 ntBASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm42790-201ENSMUST00000201268 969 ntBASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm18856-201ENSMUST00000178096 1374 ntBASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Igkv4-54A0A0G2JES9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Dancr-204ENSMUST00000132389 2347 ntBASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Igkv4-54A0A0G2JES9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm11780-201ENSMUST00000136880 516 ntBASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm19164-201ENSMUST00000210667 640 ntBASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gm7461-201ENSMUST00000058918 827 ntBASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Igkv4-54A0A0G2JES9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms