Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm13474-201ENSMUST00000122466 815 ntBASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm21814-202ENSMUST00000203277 873 ntBASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.68□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm11539-201ENSMUST00000119837 557 ntBASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms