Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm4459-201ENSMUST00000118750 468 ntBASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm12644-201ENSMUST00000119935 606 ntBASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm18669-201ENSMUST00000216049 778 ntBASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Ank2-226ENSMUST00000189368 339 ntBASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav9n-2A0A0G2JDP3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gm15372-201ENSMUST00000120729 834 ntBASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gm12497-201ENSMUST00000138778 237 ntBASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.2□□□□□ -0.62
Trav9n-2A0A0G2JDP3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms