Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm27011-201ENSMUST00000182352 972 ntBASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm44430-201ENSMUST00000203376 995 ntBASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm45058-201ENSMUST00000205810 766 ntBASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm21559-201ENSMUST00000220638 855 ntBASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Gm8587-201ENSMUST00000076538 843 ntBASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav13-4-dv7A0A075B6C2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms