Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm10653-202ENSMUST00000139570 835 ntBASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm27011-201ENSMUST00000182352 972 ntBASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm9987-201ENSMUST00000069768 567 ntBASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav6d-5A0A075B6B9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm30025-201ENSMUST00000218555 728 ntBASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6d-5A0A075B6B9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm23547-201ENSMUST00000158210 271 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms