Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Gm10698-201ENSMUST00000182663 604 ntBASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Trmt13-210ENSMUST00000198454 880 ntBASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav6-5A0A075B6B5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav6-5A0A075B6B5 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav6-5A0A075B6B5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.9□□□□□ -0.5
Trav6-5A0A075B6B5 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms