Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 AA414768-201ENSMUST00000121924 1257 ntBASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Gm6659-201ENSMUST00000174752 547 ntBASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6n-6A0A075B6B2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav6n-6A0A075B6B2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm23634-201ENSMUST00000175071 91 ntBASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav6n-6A0A075B6B2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm7977-201ENSMUST00000193787 748 ntBASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm5587-201ENSMUST00000206270 674 ntBASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav6n-6A0A075B6B2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav6n-6A0A075B6B2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms