Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-1A0A075B699 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-1A0A075B699 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.91□□□□□ -0.5
Trav9d-1A0A075B699 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav9d-1A0A075B699 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-1A0A075B699 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-1A0A075B699 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 AA414768-201ENSMUST00000121924 1257 ntBASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-1A0A075B699 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav9d-1A0A075B699 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9d-1A0A075B699 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9d-1A0A075B699 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Gm6659-201ENSMUST00000174752 547 ntBASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Gm7367-201ENSMUST00000057611 492 ntBASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-1A0A075B699 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-1A0A075B699 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms