Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Olfr129-201ENSMUST00000122318 993 ntBASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Gm27742-201ENSMUST00000184667 60 ntBASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav5-4A0A075B652 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Trav5-4A0A075B652 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav5-4A0A075B652 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav5-4A0A075B652 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Trav5-4A0A075B652 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Rprl3-201ENSMUST00000157400 290 ntBASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Gm25406-201ENSMUST00000157599 105 ntBASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav5-4A0A075B652 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Mir3081-201ENSMUST00000175305 84 ntBASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav5-4A0A075B652 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav5-4A0A075B652 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms