Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav16d-dv11A0A075B617 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.33□□□□□ -0.59
Trav16d-dv11A0A075B617 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav16d-dv11A0A075B617 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Efs-202ENSMUST00000227037 2540 ntBASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm11539-201ENSMUST00000119837 557 ntBASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav16d-dv11A0A075B617 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms