Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm6550-201ENSMUST00000187574 993 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm6089-201ENSMUST00000197666 938 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13d-1A0A075B606 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm7222-201ENSMUST00000117512 906 ntBASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm12350-201ENSMUST00000121208 462 ntBASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm1401-201ENSMUST00000122048 772 ntBASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13d-1A0A075B606 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Gm11780-201ENSMUST00000136880 516 ntBASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Gm18622-201ENSMUST00000219361 595 ntBASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav13d-1A0A075B606 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms