Protein–RNA interactions for Protein: Q9Z1J2

Nek4, Serine/threonine-protein kinase Nek4, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek4Q9Z1J2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nek4Q9Z1J2 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek4Q9Z1J2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.81■□□□□ 0.6
Nek4Q9Z1J2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek4Q9Z1J2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek4Q9Z1J2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek4Q9Z1J2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nek4Q9Z1J2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Gm15372-201ENSMUST00000120729 834 ntBASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Gm19164-201ENSMUST00000210667 640 ntBASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nek4Q9Z1J2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Gm12895-201ENSMUST00000122214 226 ntBASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Nek4Q9Z1J2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nek4Q9Z1J2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Gm12497-201ENSMUST00000138778 237 ntBASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nek4Q9Z1J2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms