Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.73■□□□□ 0.27
Nr1h3Q9Z0Y9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm10576-201ENSMUST00000191927 825 ntBASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nr1h3Q9Z0Y9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm14701-201ENSMUST00000117156 348 ntBASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nr1h3Q9Z0Y9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nr1h3Q9Z0Y9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nr1h3Q9Z0Y9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Mir1895-201ENSMUST00000122615 79 ntBASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nr1h3Q9Z0Y9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h3Q9Z0Y9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nr1h3Q9Z0Y9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h3Q9Z0Y9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nr1h3Q9Z0Y9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.69■□□□□ 0.26
Nr1h3Q9Z0Y9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms