Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Gm34391-201ENSMUST00000203706 907 ntBASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Gm18622-201ENSMUST00000219361 595 ntBASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Gm8655-201ENSMUST00000221159 852 ntBASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ClcnkaQ9WUB7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClcnkaQ9WUB7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClcnkaQ9WUB7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClcnkaQ9WUB7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
ClcnkaQ9WUB7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
ClcnkaQ9WUB7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClcnkaQ9WUB7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ClcnkaQ9WUB7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Birc2-201ENSMUST00000054878 378 ntBASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
ClcnkaQ9WUB7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Gm17971-201ENSMUST00000190239 806 ntBASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Gm43347-201ENSMUST00000200226 580 ntBASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms