Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CcsQ9WU84 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.02□□□□□ -0.49
CcsQ9WU84 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.02□□□□□ -0.49
CcsQ9WU84 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
CcsQ9WU84 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.02□□□□□ -0.49
CcsQ9WU84 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Gm18101-201ENSMUST00000215769 548 ntBASIC12.02□□□□□ -0.49
CcsQ9WU84 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CcsQ9WU84 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CcsQ9WU84 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.02□□□□□ -0.49
CcsQ9WU84 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.02□□□□□ -0.49
CcsQ9WU84 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.02□□□□□ -0.49
CcsQ9WU84 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CcsQ9WU84 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Gm6659-201ENSMUST00000174752 547 ntBASIC12.01□□□□□ -0.49
CcsQ9WU84 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CcsQ9WU84 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.01□□□□□ -0.49
CcsQ9WU84 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CcsQ9WU84 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12□□□□□ -0.49
CcsQ9WU84 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12□□□□□ -0.49
CcsQ9WU84 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CcsQ9WU84 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms