Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Gm12428-201ENSMUST00000119844 727 ntBASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col13a1Q9R1N9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col13a1Q9R1N9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Mir6977-201ENSMUST00000184960 64 ntBASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col13a1Q9R1N9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms