Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Gm15372-201ENSMUST00000120729 834 ntBASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Gm44454-201ENSMUST00000198541 138 ntBASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RpgrQ9R0X5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RpgrQ9R0X5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RpgrQ9R0X5 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RpgrQ9R0X5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms