Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trem1Q9JKE2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Gm12382-201ENSMUST00000122005 922 ntBASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Gm13158-201ENSMUST00000122007 736 ntBASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Gm27000-201ENSMUST00000182943 842 ntBASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trem1Q9JKE2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Gm27405-201ENSMUST00000184201 112 ntBASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trem1Q9JKE2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms