Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim39Q9ESN2 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.46□□□□□ -0.1
Trim39Q9ESN2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim39Q9ESN2 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim39Q9ESN2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trim39Q9ESN2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim39Q9ESN2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim39Q9ESN2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim39Q9ESN2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Gm7977-201ENSMUST00000193787 748 ntBASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Gm33142-201ENSMUST00000193913 867 ntBASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim39Q9ESN2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Gm15794-201ENSMUST00000120182 631 ntBASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Gm7284-201ENSMUST00000131667 944 ntBASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim39Q9ESN2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim39Q9ESN2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim39Q9ESN2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim39Q9ESN2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim39Q9ESN2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim39Q9ESN2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trim39Q9ESN2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms