Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Rtn3Q9ES97 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Gm6376-201ENSMUST00000209407 580 ntBASIC16.42■□□□□ 0.22
Rtn3Q9ES97 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rtn3Q9ES97 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Gm25745-201ENSMUST00000174945 133 ntBASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.41■□□□□ 0.22
Rtn3Q9ES97 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rtn3Q9ES97 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtn3Q9ES97 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rtn3Q9ES97 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn3Q9ES97 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.39■□□□□ 0.21
Rtn3Q9ES97 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms